https://ogma.newcastle.edu.au/vital/access/ /manager/Index en-au 5 The key role of terminators on the expression and post-transcriptional gene silencing of transgenes https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:39570 Wed 27 Jul 2022 14:40:24 AEST ]]> A 22-nt artificial microRNA mediates widespread RNA silencing in Arabidopsis https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:18463 Wed 11 Apr 2018 16:15:33 AEST ]]> The use of artificial microRNA technology to control gene expression in Arabidopsis thaliana https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:20851 Sat 24 Mar 2018 08:02:53 AEDT ]]> Gene regulation by translational inhibition is determined by Dicer partnering proteins https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:26557 Sat 24 Mar 2018 07:26:14 AEDT ]]> MicroRNA regulatory mechanisms play different roles in arabidopsis https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:26182 Sat 24 Mar 2018 07:24:11 AEDT ]]> Missing pieces in the puzzle of plant microRNAs https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:26181 Sat 24 Mar 2018 07:24:10 AEDT ]]> Proteomic identification of putative MicroRNA394 target genes in arabidopsis thaliana identifies major latex protein family members critical for normal development https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:24820 Arabidopsis thaliana produce defects in leaf polarity and shoot apical meristem organization. Although the miR394-LCR node has been documented in Arabidopsis, the identification of proteins targeted by LCR F-box itself has proven problematic. Here, a proteomic analysis of shoot apices from plants with altered LCR levels identified a member of the Latex Protein (MLP) family gene as a potential LCR F-box target. Bioinformatic and molecular analyses also suggested that other MLP family members are likely to be targets for this post-translational regulation. Direct interaction between LCR F-Box and MLP423 was validated. Additional MLP members had reduction in protein accumulation, in varying degrees, mediated by LCR F-Box. Transgenic Arabidopsis lines, in which MLP28 expression was reduced through an artificial miRNA technology, displayed severe developmental defects, including changes in leaf patterning and morphology, shoot apex defects, and eventual premature death. These phenotypic characteristics resemble those of Arabidopsis plants modified to over-express LCR. Taken together, the results demonstrate that MLPs are driven to degradation by LCR, and indicate that MLP gene family is target of miR394-LCR regulatory node, representing potential targets for directly post-translational regulation mediated by LCR F-Box. In addition, MLP28 family member is associated with the LCR regulation that is critical for normal Arabidopsis development.]]> Sat 24 Mar 2018 07:15:12 AEDT ]]> Chimeric DCL1-partnering proteins provide insights into the microRNA pathway https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:24496 Arabidopsis thaliana, efficient microRNA (miRNA) production requires DICER-LIKE1 (DCL1) with the assistance of a partnering protein, DOUBLE-STRANDED RNA BINDING1 (DRB1) or DRB2. The presence of either of these DRB proteins is crucial to determine the mode of action of a miRNA; i.e., cleavage or translation inhibition. Here we studied the structural determinants for the role of DRB1 and DRB2 in the miRNA pathway. We developed a series of chimeric vectors encoding different functional domains of DRB1 and DRB2, and expressed these in the drb1 mutant background in Arabidopsis under the control of the native DRB1 promoter. Complementation of the drb1 developmental phenotype was used to assess the biological role that each functional domain of DRB1 and DRB2 mediates in the miRNA-guided transcript cleavage pathway. The DRB1 amino acid sequence differs considerably to that of DRB2, and analysis of drb1 transgenic lines revealed that the first dsRNA-binding domains of DRB1 and DRB2 are functionally similar; in contrast, the dsRBD2 of DRB1 and DRB2 appear functionally distinct. Our bioinformatic analysis further suggests that the C-terminal domain of DRB2 mediates a functional role in the miRNA pathway, whereas its counterpart in DRB1 is known to be dispensable. Our results provide evidence for the differences between DRB1 and DRB2 proteins in vivo, which may be essential for the selection of the miRNA regulatory mechanisms, and suggest that these features are conserved among land plants.]]> Fri 01 Apr 2022 09:25:10 AEDT ]]>